References

Banat, I.M., R.S. Makkar and S.S. Cameotra, 2000. Potential commercial applications of microbial surfactants. Applied Microbiol. Biotechnol., 53: 495-508.
CrossRef  |  Direct Link  |  

Bass, C. and H. Lappin-Scott, 1997. The Bad Guys and the Good Guys in Petroleum Microbiology. Spring, USA., pp: 17-25.

Birkeland, N.K., 2005. Sulfate-Reducing Bacteria and Archaea. In: Petroleum Microbiology, Ollivier, B. and M. Magot (Eds.). American Society of Microbiology, Washington, DC., USA., pp: 35-54.

Cayol, J.L., B. Ollivier, B.K.C. Patel, G. Ravot and M. Magot et al., 1995. Description of Thermoanaerobacter brockii subsp. lactiethylicus subsp. nov. isolated from a deep subsurface French oil well a proposal to reclassify Thermoanaerobacter finnii as Thermoanaerobacter brockii subsp. finnii comb. nov. and an emended description of Thermoanaerobacter brockii. Intl. J. Syst. Evol. Microbiol., 45: 783-789.
CrossRef  |  PubMed  |  Direct Link  |  

Dahle, H., F. Garshol, M. Madsen and N.K. Birkeland, 2008. Microbial community structure analysis of produced water from a high-temperature North Sea oil-field. Antonie Van Leeuwenhoek, 93: 37-49.
PubMed  |  Direct Link  |  

Fardeau, M.L., M.B. Salinas, S. L`Haridon, C. Jeanthon and F. Verhe et al., 2004. Isolation from oil reservoirs of novel thermophilic anaerobes phylogenetically related to Thermoanaerobacter subterraneus: reassignment of T. subterraneus, Thermoanaerobacter yonseiensis, Thermoanaerobacter tengcongensis and Carboxydibrachium pacificum to Caldanaerobacter subterraneus gen. nov., sp. nov., comb. nov. as four novel subspecies. Int. J. Syst. Evol. Microbiol., 54: 467-474.
CrossRef  |  

Gittel, A., M.V. Kofoed, K.B. Sorensen, K. Ingvorsen and A. Schramm, 2012. Succession of deferribacteres and epsilonproteobacteria through a nitrate-treated high-temperature oil production facility. Syst. Appl. Microbial., 35: 165-174.
PubMed  |  Direct Link  |  

Grabowski, A., O. Nercessian, F. Fayolle, D. Blanchet and C. Jeanthon, 2005. Microbial diversity in production waters of a low-temperature biodegraded oil reservoir. FEMS. Microbiol. Ecol., 54: 427-443.
Direct Link  |  

Grassia, G.S., K.M. McLean, P. Glenat, J. Bauld and A.J. Sheehy, 1996. A systematic survey for thermophilic fermentative bacteria and archaea in high temperature petroleum reservoirs. FEMS. Microbiol. Ecol., 21: 47-58.
CrossRef  |  Direct Link  |  

Huang, Y.H., G.L. Ren, L. Wei, X.L. Wu and H.M. Yuan et al., 2010. Analysis of microbial community succession in Daqing oil field. Adv. Mater. Res., 113: 830-834.
CrossRef  |  Direct Link  |  

Jumas-Bilak, E., L. Roudiere and H. Marchandin, 2009. Description of ‘Synergistetes’ phyl. nov. and emended description of the phylum ‘Deferribacteres’ and of the family Syntrophomonadaceae, phylum ‘Firmicutes’. Intl. J. Syst. Evol. Microbiol., 59: 1028-1035.
PubMed  |  Direct Link  |  

Kaster, K.M., K. Bonaunet, H. Berland, G. Kjeilen-Eilertsen and O.G. Brakstad, 2009. Characterisation of culture-independent and -dependent microbial communities in a high-temperature offshore chalk petroleum reservoir. Antonie Van Leeuwenhoek, 96: 423-439.
CrossRef  |  Direct Link  |  

Li, H., S.Z. Yang, B.Z. Mu, Z.F. Rong and J. Zhang, 2007. Molecular phylogenetic diversity of the microbial community associated with a high‐temperature petroleum reservoir at an offshore oilfield. FEMS. Microbiol. Ecol., 60: 74-84.
CrossRef  |  PubMed  |  Direct Link  |  

Moses, V., 1987. Microbes and oil recovery. Microbiol. Sci., 4: 306-309.
Direct Link  |  

Orphan, V.J., L.T. Taylor, D. Hafenbradl and E.F. Delong, 2000. Culture-dependent and culture-independent characterization of microbial assemblages associated with high-temperature petroleum reservoirs. Applied Environ. Microbiol., 66: 700-711.
CrossRef  |  Direct Link  |  

Parshina, S.N., R. Kleerebezem, J.L. Sanz, G. Lettinga and A.N. Nozhevnikova et al., 2003. Soehngenia saccharolytica gen. nov., sp. nov. and Clostridium amygdalinum sp. nov., two novel anaerobic, benzaldehyde-converting bacteria. Int. J. Syst. Evol. Microbiol., 53: 1791-1799.
CrossRef  |  

Purwasena, I.A., Y. Sugai and K. Sasaki, 2014. Petrotoga japonica sp. nov., a thermophilic, fermentative bacterium isolated from Yabase Oilfield in Japan. Arch. Microbiol., 196: 313-321.
CrossRef  |  Direct Link  |  

Purwasena, I.A., Y. Sugai and K. Sasaki, 2014. Estimation of the potential of an anaerobic thermophilic oil-degrading bacterium as a candidate for MEOR. J. Petroleum Explor. Prod. Technol., 4: 189-200.
CrossRef  |  Direct Link  |  

Saitou, N. and M. Nei, 1987. The neighbor-joining method: A new method for reconstructing phylogenetic trees. Mol. Biol. Evol., 4: 406-425.
CrossRef  |  PubMed  |  Direct Link  |  

Salinas, M.B., M.L. Fardeau, P. Thomas, J.L. Cayol and B.K. Patel et al., 2004. Mahella australiensis gen. nov., sp. nov. a moderately thermophilic anaerobic bacterium isolated from an Australian oil well. Intl. J. Syst. Evol. Microbiol., 54: 2169-2173.
CrossRef  |  PubMed  |  Direct Link  |  

Sugai, Y., I.A. Purwasena, K. Sasaki, K. Fujiwara and Y. Hattori et al., 2012. Experimental studies on indigenous hydrocarbon-degrading and hydrogen-producing bacteria in an oilfield for microbial restoration of natural gas deposits with CO₂ sequestration. J. Nat. Gas Sci. Eng., 5: 31-41.
Direct Link  |  

Tamura, K., J. Dudley, M. Nei and S. Kumar, 2007. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol. Biol. Evol., 24: 1596-1599.
CrossRef  |  PubMed  |  Direct Link  |  

Tamura, K., M. Nei and S. Kumar, 2004. Prospects for inferring very large phylogenies by using the neighbor-joining method. Proc. Natl. Acad. Sci. U.S.A., 101: 11030-11035.
CrossRef  |  Direct Link  |  

Van Der Kraan, G.M., M.D. Ridder, B.P. Lomans and G. Muyzer, 2010. Sampling and Nucleic Extraction Procedures from Oil Reservoir Samples. In: Applied Microbiology and Molecular Biology in Oilfield Systems, Whitby, C. and T. Skovhus (Eds.). Springer, Dordrecht, the Netherlands, ISBN:978-90-481-9251-9, pp: 7-16.

Wang, J., T. Ma, L. Zhao, J. Lv and G. Li et al., 2008. Monitoring exogenous and indigenous bacteria by PCR-DGGE technology during the process of microbial enhanced oil recovery. J. Ind. Microbiol. Biotechnol., 35: 619-628.
CrossRef  |  PubMed  |  Direct Link  |  

Youssef, N., M.S. Elshahed and M.J. McInerney, 2009. Microbial Processes in Oil Fields: Culprits, Problems and Opportunities. In: Advances in Applied Microbiology, Laskin, A.I., S. Sariaslani and G.M. Gadd (Eds.). Academic Press, Burlington, Massachusetts, USA., pp: 141-251.